Insertion junction: CLIP2.032824_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032824
Chromosome:chromosome 1
Location:4908986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCGCCCAACCATTCGCTCCCGCCCTTCCCACAACTCTCGCATCCCC
Internal bar code:GTCGGGAGTGAGTGCTGAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAGATGGCGATCTCGG
Suggested primer 2:CTGCCATTGTGGTACGGACT