Insertion junction: CLIP2.032832_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032832
Chromosome:chromosome 16
Location:1770784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654992 (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCCGCGCCGCCCTGGGGACAGCAAGAGCGGCAAGGGAAAAGAAGACC
Internal bar code:AACTATTTCTATCTGTAAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3445
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAGAAGCCACGTGTAAG
Suggested primer 2:TAGTCTTTGAGGTCCACGCG