Insertion junction: CLIP2.032834_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032834
Chromosome:chromosome 13
Location:4523964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603100 GT90-48,GT90F48 GT90 family protein 48; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTCACTGAAGCGCTGCACCTCCGTCAGGATGGCGTCAAAGGAGTCA
Internal bar code:TATTGTGATGTCATCGTAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1799
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCATGTGTGTGTGTGC
Suggested primer 2:GAAGCTTTTCACGCTGGCAA