Insertion junction: CLIP2.032837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032837
Chromosome:chromosome 3
Location:3285770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165700 PDC3 (1 of 1) 4.1.1.1 - Pyruvate decarboxylase / Pyruvic decarboxylase; Pyruvate decarboxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGCAGAAAGAGCGAGGAAGATAGTGTGGTCTGTGCTCTGACGACGG
Internal bar code:CTTCAGCGTTCACCGCGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGACTATCCTTCGGGC
Suggested primer 2:CCTCCCACACAGAAGGTCAC