Insertion junction: CLIP2.032842_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032842
Chromosome:chromosome 12
Location:1623286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486900 (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCTGGTACGCAGGGAGGAGATGCTGACGACATGCACAGAGGACCGG
Internal bar code:ATGACTGTGACTTATAAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATCCCCCTCTCCTCTCC
Suggested primer 2:GGCGCTACAACAAGCATACG