Insertion junction: CLIP2.032848_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032848
Chromosome:chromosome 12
Location:5211901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527150 (1 of 1) PF09234 - Domain of unknown function (DUF1963) (DUF1963) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGTGTATGAAGTGTACGGGAGGTTGGCACTGAGGGGAAGAAAGCCT
Internal bar code:GCTGTGGCGTGTTTATTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:5177
LEAP-Seq percent confirming:74.7368
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGACCTCACACCTTTCA
Suggested primer 2:ATGACTCGGTCAAAGCCCAG