Insertion junction: CLIP2.032850_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032850
Chromosome:chromosome 16
Location:5365137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGAGGACGGCGTGCCACCACCACCATGAAACACATACACCCATACGG
Internal bar code:CGAATTACGTTTTTTTGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGCCAGCTGATACCCTA
Suggested primer 2:AGTTGTACGGCTTGAGAGGC