Insertion junction: CLIP2.032851_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032851
Chromosome:chromosome 1
Location:3005377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018900 (1 of 1) K11971 - E3 ubiquitin-protein ligase RNF14 [EC:6.3.2.19] (RNF14, ARA54) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGTATGTGTGTGCGCGTGCGTGCGTGTCAGCAATCACAGGGAAAGA
Internal bar code:ATAGGATGTAAGAAGGGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:708
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGTGACTCGTCGAACAC
Suggested primer 2:CAGGCTCTAGCGCTACAGTC