Insertion junction: CLIP2.032856_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032856
Chromosome:chromosome 2
Location:6971994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389356 (1 of 1) K03457 - nucleobase:cation symporter-1, NCS1 family (TC.NCS1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGGTGTCATCCACACACGGCTTCGTCAACACCTGGCTCATCGGTGG
Internal bar code:AAGCGCGCACAATATGCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGACTTGTCGCCCTTG
Suggested primer 2:ATCCTGGGATGGTATGGGCT