Insertion junction: CLIP2.032860_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032860
Chromosome:chromosome 13
Location:3406634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586800 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCACAATGCGGTACCAGCACCAGCGGGAAGAGATTTACAGCATGCGTG
Internal bar code:ACGCGTGTAGTAACGTACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCGGCTCGAACTTCGTT
Suggested primer 2:GAAGACGCTGAGGTGTGTGA