Insertion junction: CLIP2.032867_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032867
Chromosome:chromosome 1
Location:1428233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007600 (1 of 2) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTACCCAACACCCCCGGCTATCTGGGACTGGAACCTCCTACCCTCC
Internal bar code:GACAGAGCTATATCTCCGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAACGACATGCCACAG
Suggested primer 2:CCCATTCCTGGAATGCCCTT