Insertion junction: CLIP2.032874_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032874
Chromosome:chromosome 17
Location:1176501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704400 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGCGTCGCACCCCTGCTGCTCCCGTGTCGCGCTCACATGAAACCGCA
Internal bar code:GGTGTTCACGTAAGTGTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGGGATATGGGTACGG
Suggested primer 2:CATACCAGATCCCCACCTGC