Insertion junction: CLIP2.032880_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.032880
Chromosome:chromosome 3
Location:8235943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGACCTTACGGCCAGCCTCGAGAACGATCACTGTAGTTCACGTCA
Internal bar code:TAAATTTGGAGTAGTCAAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:6439
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGCTGGAGCTGTAGGG
Suggested primer 2:ACGAGCTGGTTGAAGGTGAG