Insertion junction: CLIP2.032892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032892
Chromosome:chromosome 16
Location:6938648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671825 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGGAGCTCACCAAAACCGACTGCGCTCAGTACGTAATGCTGTTTGA
Internal bar code:TTCATGGTTCGCCTTCGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2867
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCTTCATCCTCGTCCG
Suggested primer 2:AGGAATCGTGTGTGGGGAAC