Insertion junction: CLIP2.032896_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032896
Chromosome:chromosome 2
Location:7017480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389726 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGACGCTGCCGCGAGCGTCGCAGGCCCAGGTGCAGCGCGCGCCTGCG
Internal bar code:CAGGACAGCCTCGTTCCTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:51.2195
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGCTGGACCTACCGTGA
Suggested primer 2:ATGGCTTCCGACTGACATCG