Insertion junction: CLIP2.032901_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032901
Chromosome:chromosome 17
Location:5034511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCCTAGCCTCGCCGTCGTGTTTTATGTTATGGTGAGTTGGTATCAC
Internal bar code:AGGCTCGTGAAGGTCGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCGCACTTTTCAAGCC
Suggested primer 2:TACACGTGTCACTGTCAGGC