Insertion junction: CLIP2.032906_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032906
Chromosome:chromosome 7
Location:5395570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350450 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B outside_mRNA
Cre07.g350451 (1 of 2) IPR001680//IPR017986//IPR020472//IPR027417 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCGCGGGCTGCTGCAGCTGCTGCGGGGTCACATACACCACGCGGCCA
Internal bar code:TTTCGCGTCAGTGGGGGTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2807
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCAGCCTTTCGCCTTAT
Suggested primer 2:CTCCGCCAGATAGCTGTAGC