Insertion junction: CLIP2.032927_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032927
Chromosome:chromosome 2
Location:5239480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112400 CHI1 (1 of 1) K12310 - Di-N-acetylchitobiase (CTBS); Chitinase-like hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGTGGGATGCATGGCCAGGACCAAATGGTTGATTGGGGCAGTGGAGA
Internal bar code:TGGGTATATGTGCTGTAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCCCAGAAGTTCCGCTG
Suggested primer 2:TTGCCAAGGTTTCGGATCGA