Insertion junction: CLIP2.032952_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.032952
Chromosome:chromosome 12
Location:2552040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506900 (1 of 1) PTHR21568:SF0 - TRNA PSEUDOURIDINE SYNTHASE PUS10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGGCCTGGCTCTGGTATTAGTTTGGGGATTGGAACAAACTACCCCC
Internal bar code:AAAGTCTTTGAATTTTGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:TAGTCGGCTGTGCTCTCTCT