Insertion junction: CLIP2.032956_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.032956
Chromosome:chromosome 6
Location:2378337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268300 HTA9 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCAGCACACCGCCGGACGCGATGGTCACCTCGCCCAGCAGCTTGCC
Internal bar code:ATTTCATGACTCGTTAGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:5102
LEAP-Seq percent confirming:96.6942
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGATAGGCAGCGATGG
Suggested primer 2:CAAGGCACTGTCCGTTTTGG