Insertion junction: CLIP2.032956_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.032956
Chromosome:chromosome 6
Location:2378340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268300 HTA9 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCCGTGCTGCTGCCCAAGAAGACCAAGGGCGGCAAGGGCAGCGAGG
Internal bar code:ATTTCATGACTCGTTAGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2596
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCACTGTCCGTTTTGG
Suggested primer 2:ATTGGGATAGGCAGCGATGG