Insertion junction: CLIP2.032957_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032957
Chromosome:chromosome 10
Location:374270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTTAGTCATGCATGGAAACCCCCTCTTAACCCCTCCCGCCACCGGGC
Internal bar code:GACAGAAAAAGTCGTAGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:412
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCGCGAAGAACAGGAT
Suggested primer 2:CCACTTCCAGCCAGAGAAGG