Insertion junction: CLIP2.032957_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032957
Chromosome:chromosome 10
Location:374274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGATGTTGGGGGAGCCGGATGAACAGAAGTCGACACGGTACTTGGGG
Internal bar code:GAAGGCCTGACTGATCGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:547
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTTCCAGCCAGAGAAGG
Suggested primer 2:TGAAGCGCGAAGAACAGGAT