Insertion junction: CLIP2.032968_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032968
Chromosome:chromosome 11
Location:3399234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477100 FAP97 (1 of 1) IPR003882//IPR029488 - Pistil-specific extensin-like protein // KIAA1430 homologue; Flagellar Associated Protein 97 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTCTCCTCCTCATCGTCCTCCACGGGCTCATCCACCACCGCCGACT
Internal bar code:GTATAACCGATATGGGAATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3820
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGATTTTGAGCCCACG
Suggested primer 2:ACGTCGGCACTTCACTTCAT