Insertion junction: CLIP2.032969_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032969
Chromosome:chromosome 16
Location:6832254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCCGGGCCGCAACTGCATCGTGGGCGACGGACTGACGGTGGTGGACG
Internal bar code:GCAATGGGTTCGAGTGAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCAAAACCCCCACACAG
Suggested primer 2:TTCATATGAGGAGACGCGCC