Insertion junction: CLIP2.032972_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032972
Chromosome:chromosome 6
Location:2601183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00026443

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACGCCACGGCGCAGGCAGGCAGTGACGTTGCCGGGAGTCACGGACGC
Internal bar code:TTTGCTGGAGCCAATGCCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2528
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAGGTTGGCAAAGTC
Suggested primer 2:GCCCTGTTCTGCATCTCAGT