Insertion junction: CLIP2.032983_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.032983
Chromosome:chromosome 12
Location:4366256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801409 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTTCGCTCTGCCGGGACTGGCGTGTGTGGGCCAGCTGGTTGCAGCG
Internal bar code:CGTCTGTAGGTGTGGACCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3039
LEAP-Seq percent confirming:14.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GCACTCTCCCCACCAGTTAC