Insertion junction: CLIP2.032998_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.032998
Chromosome:chromosome 7
Location:1921186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325748 (1 of 1) 3.5.2.9 - 5-oxoprolinase (ATP-hydrolyzing) / Pyroglutamase (ATP-hydrolyzing) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCACAGCGCACACACACATCGCGCGGGGCAGGCGGTCACAGCACGGG
Internal bar code:AAGGGTCAAGTATTTAAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2649
LEAP-Seq percent confirming:89.2308
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTTGAGACAACCACCGC
Suggested primer 2:AGGTACACTGAACACAGGCG