Insertion junction: CLIP2.033001_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033001
Chromosome:chromosome 5
Location:1430979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234645 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGCTCTGGAGGGACGGAGTGGGACCAGTGCAGCTGGTGGTGTGAGG
Internal bar code:GCCAACTCCAGACAATATGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGACCCCCTTTTGCTAG
Suggested primer 2:TCACTCCATACACGTGTCGC