Insertion junction: CLIP2.033002_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033002
Chromosome:chromosome 6
Location:3287467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277300 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCGCTCGGCCACAGCCACCACCGCCCCCGGCACCACCGCCGTACG
Internal bar code:CTGTTCTTGGCGCCCTAAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGGTGATGTGCGTCAG
Suggested primer 2:GGTTTTCGTTCTTGCGTGCT