Insertion junction: CLIP2.033002_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033002
Chromosome:chromosome 6
Location:3287469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277300 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCAGACCTACAACCCCGTTCGCCTTGCAGGGACGCTCGAGGCGCAG
Internal bar code:TAACCTCCCAAATGCATCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTTCGTTCTTGCGTGCT
Suggested primer 2:ATGGAGGTGATGTGCGTCAG