Insertion junction: CLIP2.033014_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033014
Chromosome:chromosome 13
Location:888380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567550 (1 of 1) IPR000719//IPR000817//IPR001245//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Prion protein // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGTGCCCTTTGTAAATGAAGTGGTCCACATAGCTGCAGCATGAGAGG
Internal bar code:CACTGTTTCTGCTTTCGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2419
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTCATATTTCGAGCCT
Suggested primer 2:GTGTGTGTGTGTTGTGGTGG