Insertion junction: CLIP2.033021_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033021
Chromosome:chromosome 11
Location:495035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467593 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCTGGAAGGGTAGGGCGAGGAGCCGGGTAACGAGGCAAGAGGGCTG
Internal bar code:GATCTTGACAACTTTGGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2243
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACGGCGTTGTTGTAGT
Suggested primer 2:CCATTGCCGATAGATCCCCC