Insertion junction: CLIP2.033022_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033022
Chromosome:chromosome 9
Location:5978613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCTTCGGGGGTCCCACAGGGACGCAGGGAATTGTAGCTTGCAAACG
Internal bar code:GTGCAACCGGAAACACAGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1122
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGCTGGTTTGGAGGCTG
Suggested primer 2:CCCGTGCACTCTCATTCACT