Insertion junction: CLIP2.033023_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033023
Chromosome:chromosome 6
Location:8480830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308950 (1 of 2) PF02453 - Reticulon (Reticulon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTTGACTTGTGCGCCAATCCCGCTTCACCCGTTCTCCATGAACGGCT
Internal bar code:GGGTTGTACGGAGGTGGACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGTACCGCTCCTCTAC
Suggested primer 2:CGCGGCAGTATCTGTCTCAT