Insertion junction: CLIP2.033026_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033026
Chromosome:chromosome 5
Location:1410573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234640 (1 of 1) IPR000048//IPR011989//IPR016024 - IQ motif, EF-hand binding site // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCTCAAGCCGCTTCTCTCTCTTTTTGAGGGGCTTTTGCCCTTACCC
Internal bar code:GTGTGCCTTGACCCCCAATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCAACGAAAACGAGCGG
Suggested primer 2:GTGTTTTCCCCGTGTTCACG