Insertion junction: CLIP2.033034_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033034
Chromosome:chromosome 7
Location:6116954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355650 AMT1F,AMT6 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGGGCCACAGGGCCACACGACCACACGGCCAGCCCACCCCCACGGCT
Internal bar code:TCTATTACAGTCATGCGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCAAGAGGAGGAGGAG
Suggested primer 2:TGGCCTATGCTTGACAAGGG