Insertion junction: CLIP2.033036_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033036
Chromosome:chromosome 12
Location:6020479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTTTCCCGACACTCGCGACACAACATGCACGGTCGCGGCATCCGCG
Internal bar code:TTGTTGTAACCTGTATATCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1992
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCTTCCCATACAGCCC
Suggested primer 2:ACTTCCATCACCTGTGGCTG