Insertion junction: CLIP2.033049_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033049
Chromosome:chromosome 15
Location:818549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639056 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGTGCCGGCGACATGTGAAGAATGCGGGAGAGCAAAGGACAGCGAT
Internal bar code:GTGAGGGTATCAAGTCGAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACACAACCTCGTGACAC
Suggested primer 2:TGAGGGATGAGGGAGTGAGG