Insertion junction: CLIP2.033050_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033050
Chromosome:chromosome 10
Location:4224917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449350 (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCTGTCCAAGGCGCCCATTGGATAGTGCTGAGCTGTTGTGGTGCCG
Internal bar code:CGGGTCTTCTGGCAGCGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5230
LEAP-Seq percent confirming:90.7975
LEAP-Seq n confirming:148
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:163

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCTCGTTTGGCTGTCCA
Suggested primer 2:GGCTCAGTCGTATCCAGACG