Insertion junction: CLIP2.033057_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033057
Chromosome:chromosome 11
Location:216126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467555 (1 of 1) PF00023//PF13857 - Ankyrin repeat (Ank) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTACTTATTGGTTTCGTCCGTCACATCCTACCTTATTTCTGATGCCAT
Internal bar code:GACCTGATACTCCTTAGCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTATGGATAGGTGGCGGG
Suggested primer 2:TCCACTCGTACCGCTTTTCC