Insertion junction: CLIP2.033069_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033069
Chromosome:chromosome 16
Location:1363021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651900 CRI1,OPR129,OPR126,CRTISO OctotricoPeptide Repeat protein 129 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACATTATCTAGCACACGCCACACACAGCCATCACATTCCCTTTCATC
Internal bar code:CCGAGCTTAGGGGGGGGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTGTTGCATGTATGGG
Suggested primer 2:GGAGACAGGGACTCGTTGTG