Insertion junction: CLIP2.033079_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033079
Chromosome:chromosome 9
Location:6715447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417000 GT90F20,GT90-20 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; GT90 family protein 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCGAGTAGTCGGGCCACAGCCAGTTGCTGGGCGTCACGCCGCGCACT
Internal bar code:ATGGGATAATATCGTTCTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4423
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTATTGGCCGCTCTGC
Suggested primer 2:GCACCACAAGTTCGGACAAC