Insertion junction: CLIP2.033079_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033079
Chromosome:chromosome 9
Location:6715447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417000 GT90F20,GT90-20 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; GT90 family protein 20 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTGGCCAGAGATTGGCGCAGCGTCTTACGCGGTGCTGCACCAACGC
Internal bar code:GGTCGATAAGACGCGTGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCACAAGTTCGGACAAC
Suggested primer 2:ATACCTATTGGCCGCTCTGC