Insertion junction: CLIP2.033087_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033087
Chromosome:chromosome 3
Location:383754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144747 (1 of 1) PTHR10641//PTHR10641:SF518 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 100-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACCCCACCCACCAAATGTACGCGACCGTTATCTTACCAAATATGC
Internal bar code:ACAGATTTTCAAACTACGCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3287
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAGACAGCTTCATGGCC
Suggested primer 2:AACCGCTGGTGAGATGAGTG