Insertion junction: CLIP2.033089_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033089
Chromosome:chromosome 2
Location:226107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800153 intron
Cre02.g800155 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAGCATGGAGCTAATAGACCTGCAGCTGCTGCGGCGCAATGGGGACT
Internal bar code:TCAGTGAGATATCGGATAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3607
LEAP-Seq percent confirming:55.1181
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCAATCAACAGCAACAA
Suggested primer 2:CCTCCCTCGTGTTCTGGTTC