Insertion junction: CLIP2.033092_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033092
Chromosome:chromosome 10
Location:1134341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425501 (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCATGGGATGGTGGCAGGCATTATCCACAACTCCTTTCCCGCCTCCT
Internal bar code:CGAGTTCGAATGATACACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAAAGTCCCTCGCCTTC
Suggested primer 2:TGAACGCGTCCACACATACA