Insertion junction: CLIP2.033093_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033093
Chromosome:chromosome 6
Location:4292530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278259 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCCCTGGTCCCGGCGCCGCGGGCCGCCGCAGCAGCAGCGACTCCCG
Internal bar code:AAGCAGACACATTATATTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGGTGGAAGAACAGGTC
Suggested primer 2:CAACCCTTTCCCTCTCGCAT