Insertion junction: CLIP2.033096_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033096
Chromosome:chromosome 2
Location:1461973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083750 ROC75 (1 of 1) IPR006447//IPR009057//IPR017930 - Myb domain, plants // Homeodomain-like // Myb domain; Rhythm Of Chloroplast 75 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATAACCTATCTCTTCCGCGGGCTCACCTCTGCGGTCCTGCCGCCCATC
Internal bar code:TAGCCCAACTTAATGCATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:324
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCATGGTAGCGGTCTT
Suggested primer 2:CTACCTTGCAGGACAGGTCG