Insertion junction: CLIP2.033097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033097
Chromosome:chromosome 9
Location:1296551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400750 AMT5,AMT1Ea,AMT1E Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCATAACTGCATCATTCGGCCACGTCCATCCACGCCCGACCGTGTT
Internal bar code:AGTAAAGGGCCGATTGTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5326
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCTGTCTACCTCGCTA
Suggested primer 2:ACTTTGCACCCAGAAACCCA